Top

ARID1A is detected as a mutational cancer driver

ARID1A reports

Gene details
ARID1A
Ensembl ID ENSG00000117713
Transcript ID ENST00000324856
Protein ID ENSP00000320485
Cancer types where is driver 33
Cohorts where is driver 87
Mutated samples 1,168
Mutations 2,045
Mode of action Ambiguous
Known driver True
Method signals per Cancer Type
Cancer type Methods Samples Samples (%)
ClustL HotMAPS smRegions Clustered Mutations
CBaSE dNdScv Recurrent Mutations
FML Functional Mutations
MutPanning Tri-nucleotide specific bias
combination Combination
In-silico saturation mutagenesis
Alt text
In silico saturation mutagenesis profiles across all tumor types where a specific model is available. Driver mutations (displayed as red dots) are mapped to their positions in the canonical transcript. The dendrogram on the right represents a hierarchical clustering of the profiles based on site-by-site concordance via Matthews Correlation similarity. The track on the top displays the Pfam domains mapping to the canonical transcript. See the FAQs for more details about the in silico saturation mutagenesis computed with boostDM.
Model Mutations Driver mutations Driver mutations (%)
BLCA (Bladder Urothelial Carcinoma) 20556 789 3.84
BRCA (Invasive Breast Carcinoma) 20556 767 3.73
ESCA (Esophageal Adenocarcinoma) 20556 2029 9.87
HC (Hepatocellular Carcinoma) 20556 770 3.75
LUNG_CANCER (Lung) 20556 770 3.75
PAAD (Pancreatic Adenocarcinoma) 20556 1812 8.81
ST (Stomach Adenocarcinoma) 20556 796 3.87
UCEC (Endometrial Carcinoma) 20556 767 3.73
Observed mutations in tumors
The mutations needle plot shows the distribution of the observed mutations along the protein sequence.
Mutation (GRCh38) Protein Position Samples Consequence