SMAD4 is detected as a mutational cancer driver

SMAD4 reports

Gene details
Ensembl ID ENSG00000141646
Transcript ID ENST00000342988
Protein ID ENSP00000341551
Cancer types where is driver 9
Cohorts where is driver 29
Mutated samples 466
Mutations 598
Mode of action Loss of function
Known driver True
Method signals per Cancer Type
Cancer type Methods Samples Samples (%)
ClustL HotMAPS smRegions Clustered Mutations
CBaSE dNdScv Recurrent Mutations
FML Functional Mutations
MutPanning Tri-nucleotide specific bias
combination Combination
In-silico saturation mutagenesis
Alt text
In silico saturation mutagenesis profiles across all tumor types where a specific model is available. Driver mutations (displayed as red dots) are mapped to their positions in the canonical transcript. The dendrogram on the right represents a hierarchical clustering of the profiles based on site-by-site concordance via Matthews Correlation similarity. The track on the top displays the Pfam domains mapping to the canonical transcript. See the FAQs for more details about the in silico saturation mutagenesis computed with boostDM.
Model Mutations Driver mutations Driver mutations (%)
COREAD (Colorectal adenocarcinoma) 101 90 89.11
ESCA (Esophageal cancer) 57 50 87.72
PA (Pancreatic cancer) 2 2 100.00
PAAD (Pancreas adenocarcinoma) 119 105 88.24
Observed mutations in tumors
The mutations needle plot shows the distribution of the observed mutations along the protein sequence.
Mutation (GRCh38) Protein Position Samples Consequence