﻿# IntOGen RELEASE 04/11/2019
# Headers of the cohorts files
# For further information about methods please visit the documentation website: https://intogen.readthedocs.io/en/latest/index.html
# To access the source code of intogen please visit: https://bitbucket.org/intogen/intogen-plus/src/master/


Cohorts.tsv


1        COHORT: Name of the cohort. 
2        CANCER_TYPE: Name of the cancer type associated with the cohort. 
3        SOURCE: Source of the data (TCGA, PCAWG, HARTWIG, etc.)
4        PLATFORM: Whole-exome sequencing (WXS) or Whole-genome sequencing (WGS). 
5        PROJECT: Name of the cohort project.  
6        REFERENCE: Pubmed ID of the publication. 
7        TYPE: Type of cohort {“Primary”, “Metastatic”, “Relapse”}
8        TREATED: Treatment status {“Treated”, “Untreated”}
9        AGE: Age status {“Adult”, “Pediatric”}
10        SAMPLES: Number of samples (before filtering by intOGen). 
11        MUTATIONS: Number of total of mutations in the cohort (before filtering by intOGen). 
12        WEB_SHORT_COHORT_NAME:  Short name in the intOGen website. 
13        WEB_LONG_COHORT_NAME: Long name in the intOGen website.
